CDS

Accession Number TCMCG042C39557
gbkey CDS
Protein Id XP_016471693.1
Location complement(join(17211..17342,17683..17845,18533..18735,18819..18956,19071..19157,19238..19310,19764..19958,20442..20518,20605..20676,21275..21435,21515..21701,21782..21901,22019..22102,22178..22371,22835..23002,23181..23411,23533..23620,23719..23880,28666..28785))
Gene LOC107793770
GeneID 107793770
Organism Nicotiana tabacum

Protein

Length 884aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA319578
db_source XM_016616207.1
Definition PREDICTED: E3 ubiquitin-protein ligase BRE1-like 2 isoform X1 [Nicotiana tabacum]

EGGNOG-MAPPER Annotation

COG_category O
Description Zinc finger, C3HC4 type (RING finger)
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K10696        [VIEW IN KEGG]
EC 2.3.2.27        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway -
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0002376        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0006325        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006513        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006952        [VIEW IN EMBL-EBI]
GO:0006955        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009965        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010016        [VIEW IN EMBL-EBI]
GO:0010154        [VIEW IN EMBL-EBI]
GO:0010162        [VIEW IN EMBL-EBI]
GO:0010228        [VIEW IN EMBL-EBI]
GO:0010390        [VIEW IN EMBL-EBI]
GO:0010431        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016567        [VIEW IN EMBL-EBI]
GO:0016569        [VIEW IN EMBL-EBI]
GO:0016570        [VIEW IN EMBL-EBI]
GO:0016574        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022611        [VIEW IN EMBL-EBI]
GO:0032446        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032504        [VIEW IN EMBL-EBI]
GO:0033523        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042802        [VIEW IN EMBL-EBI]
GO:0042803        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0045087        [VIEW IN EMBL-EBI]
GO:0046983        [VIEW IN EMBL-EBI]
GO:0048316        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048609        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051276        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0070647        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGAGAATTCTGCTGCTGCATCTGACGAGCCTCAAAAGAAGCGTCCTCATCTCAACACTGTTTTAATCTCCTCTCCTACGATGGCTCGCCATTCTAAAGCTTCTTCTGATAATAAAACTGTTGATGCTGCAGTTCTCCATTATCAAAATCAAAAACTAGTTCAGCAGTTAGATGCACAGAAACATAAGTTGCATGATCTTGAAGCCAAAATGAAAGAATTGAGGGACAGACAAGCTTCTTATGATAACTTCTTGGTTAAGTTAAATCGAATCTGGAATCAGCTAGATGATGATCTGATTCTCCTTGGAGCATCCAGTGGGGCAGATCAAATTGCTTTGAAGAGCTTGGATCATCTAGATTATTCTCGAGGTTCAGTTCCATCTTGTCCTGCGGAGGAAATGTTCCTGTGTAGGGTGTTGAAAACCAATGATATTCCAGGCGACGCCAATGCTGGATCCATTGTGAATATCAAGGAAGCTCTTGATCTGCGCCATTCTTCTACTCTTGAGTTGATGAAATCGTTGGAAAACGCTATTGATGCTCAGCGTATTAAAACTGAAAATCTTACTCATGTTTTGGAAGGAAAGCCATCAGCAGAAGATGCTATCATTCTTTTAAGTAAGATCGATGATATGATGAAAGATGAGGCTAATTATCTCCGTCAAGTAATTGATGTTCTTCATTTGAAACACAAAGAATATGCTGATGCAATCGAAGCTTGTAATCAAAGCCATTCAGTGGATCAATCTGAGTTAAAGCGCCTTGAAGGTGAGCTGGAGGAAAGCATGTCAGAACTTGAAGATAGTAGAAGGAAGTTAGTTACTCTGAAAATGCAGAAAGATTTGGCATCTGGGGGGCAGGTAACAGTTTCAAGTGCGGTAAATGGTAGTATGTCACCAGAGAAGCCTACAGACCGAACAAAAGGTGTGCGGGAACTGAAGGAGTCTATAGAAGAGGCAAAGGCGCTGAAAGAGGACCGCCTCTCTGAGCTTCAAGATGCCCAGGAAGATAATCTACATTTGTTGAAGCAGTTGCAAGATCTTCAGAATGAACTAAAGGATGACAGATACGTGTCTTCATCTCGTGCTTATACCTTACTCCATGATCAACGTCACCATTGGAATGCTGAGGCAGAGCGATACAAAGCTCTGACAGACTCTCTTCAGGCTGACAGGTCTTTCATCGTACGGAAGGAGAAAGAACTGGTTATGAAAGCAGAGGCTATGGATTCAGCAAGGAAAGCAGTTGATAACTCCGAGTCAAGGATTGAGGAATTGGAGCATCGCATGCACAGATGCATTATTGGAAAAAATGAGCTGGAAATCAAAATGGAAGAAGCAATTCAAGATGCAGGAAGAAAAGACATTAAAGAGGAGTTTCAGGTGATGGGCTCTGCTTTATCAAAAGAAATACAAATGATGGAAGCTCAGCTGAATCGTTGGAAGGAGACAGCTAAGGAAGCTGTTTCCTTACGTGAAGAAAGACAGTCATTGGAAGCTTCAATAGGAAGAAAGGCTACTGAGCACAAAAACTTGATCAATAAATGTGCTCACCAGACTGGGGAGATCCGAACGCTAAAGGAACTTGCTGAGAAGATGCAGAGGGACAAACAGGAACGTCAAATATTCTTGGACATGCTTGGCCAGCAAATCTATGACAACAGAGACATAACGGAAATCAGAGAGTCGGAGAAAAGAGCTCACGCACAAGCTGAAATTTTGAGAGCTGCTTTGAATGAACATGATTTGGAATTGAGAGTGAAAGCTGCTAATGAAGCTGAGGCTGCTTGTCAGCAGAGGCTTTCCGCTGCTGAGGCAGAAATTGCAGAATTGAGGGCAGAACTGGATGCTTCTGACAGAGGTGTTTTAGAGCTAAGAGAAGCGATAAAAATAAAAGAAGGGGAATCAGAAACTTATATTTCCGAGATTGAGACTATTGGTCAAGCCTATGAAGACATGCAGACACAGAACCAACATCTTCTCCAGCAGCTGGCAGAGAGAGATGATTATAACATAAAGTTAGTATCTGAGAGCGTGAAGATAAAGCAGGAACAAAGCTTGCTTCTCTCTCGGAAGCAGGTATCAACAGGTAAACTTCAAAAGGCTAAAACATCACTGGAATCTCTGAAAATGAGGATGGCTCAAAGTGAAGACCAGATGAAAGTTCACATCACGGAAGCTTTAAGTTATATCCAAGAAGATAGACATCTTGCAGTCACCCTGGAAACTGCCAAGCGAGAATTGGGAGATGCTGATAAGGAATTGAAGTGGCTGAGATCTGCTGCTTCCTCCGCTGATAAGGAATACGAACAGCTCAAGAGGAAGTTGGCCGAAATAGGGGTGGAGCTGGGAACTGAAAGGAGTGAGAAAAAGAAGCTTGATGAAGAGGCAGTGGAGTTGAACAGAACTGTTGATGAGTTGACTTCTGCAAGTGGCGAGGCTGCAGTACAAAAACTGCAGGATGAAATCAATGATTGCAAGGCTATTCTCAAATGTGGAGTGTGTCTTGATCGGCCAAAAGAGGTTGTAATCACAAAATGTTATCATCTCTTCTGCAATCCATGTATTCAGAGAAATTTAGAGATTCGTCATCGCAAGTGCCCTGCTTGTGGAACTGCTTTTGGACAAAACGATGTTCGTTTTGTGAAAATCTGA
Protein:  
MENSAAASDEPQKKRPHLNTVLISSPTMARHSKASSDNKTVDAAVLHYQNQKLVQQLDAQKHKLHDLEAKMKELRDRQASYDNFLVKLNRIWNQLDDDLILLGASSGADQIALKSLDHLDYSRGSVPSCPAEEMFLCRVLKTNDIPGDANAGSIVNIKEALDLRHSSTLELMKSLENAIDAQRIKTENLTHVLEGKPSAEDAIILLSKIDDMMKDEANYLRQVIDVLHLKHKEYADAIEACNQSHSVDQSELKRLEGELEESMSELEDSRRKLVTLKMQKDLASGGQVTVSSAVNGSMSPEKPTDRTKGVRELKESIEEAKALKEDRLSELQDAQEDNLHLLKQLQDLQNELKDDRYVSSSRAYTLLHDQRHHWNAEAERYKALTDSLQADRSFIVRKEKELVMKAEAMDSARKAVDNSESRIEELEHRMHRCIIGKNELEIKMEEAIQDAGRKDIKEEFQVMGSALSKEIQMMEAQLNRWKETAKEAVSLREERQSLEASIGRKATEHKNLINKCAHQTGEIRTLKELAEKMQRDKQERQIFLDMLGQQIYDNRDITEIRESEKRAHAQAEILRAALNEHDLELRVKAANEAEAACQQRLSAAEAEIAELRAELDASDRGVLELREAIKIKEGESETYISEIETIGQAYEDMQTQNQHLLQQLAERDDYNIKLVSESVKIKQEQSLLLSRKQVSTGKLQKAKTSLESLKMRMAQSEDQMKVHITEALSYIQEDRHLAVTLETAKRELGDADKELKWLRSAASSADKEYEQLKRKLAEIGVELGTERSEKKKLDEEAVELNRTVDELTSASGEAAVQKLQDEINDCKAILKCGVCLDRPKEVVITKCYHLFCNPCIQRNLEIRHRKCPACGTAFGQNDVRFVKI